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10.1371/journal.pone.0245164

http://scihub22266oqcxt.onion/10.1371/journal.pone.0245164
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33406112!7787525!33406112
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suck abstract from ncbi


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pmid33406112      PLoS+One 2021 ; 16 (1): e0245164
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  • Development of a reverse transcription recombinase polymerase amplification assay for rapid and direct visual detection of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) #MMPMID33406112
  • Lau YL; Ismail IB; Mustapa NIB; Lai MY; Tuan Soh TS; Haji Hassan A; Peariasamy KM; Lee YL; Abdul Kahar MKB; Chong J; Goh PP
  • PLoS One 2021[]; 16 (1): e0245164 PMID33406112show ga
  • Rapid diagnosis is an important intervention in managing the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) outbreak. Real time reverse transcription polymerase chain reaction (RT-qPCR) remains the primary means for diagnosing the new virus strain but it is time consuming and costly. Recombinase polymerase amplification (RPA) is an isothermal amplification assay that does not require a PCR machine. It is an affordable, rapid, and simple assay. In this study, we developed and optimized a sensitive reverse transcription (RT)-RPA assay for the rapid detection of SARS-CoV-2 using SYBR Green I and/or lateral flow (LF) strip. The analytical sensitivity and specificity of the RT-RPA assay were tested by using 10-fold serial diluted synthetic RNA and genomic RNA of similar viruses, respectively. Clinical sensitivity and specificity of the RT-RPA assay were carried out using 78 positive and 35 negative nasopharyngeal samples. The detection limit of both RPA and RT-qPCR assays was 7.659 and 5 copies/muL RNA, respectively with no cross reactivity with other viruses. The clinical sensitivity and specificity of RT-RPA were 98% and 100%, respectively. Our study showed that RT-RPA represents a viable alternative to RT-qPCR for the detection of SARS-CoV-2, especially in areas with limited infrastructure.
  • |COVID-19/*diagnosis/genetics[MESH]
  • |Humans[MESH]
  • |Malaysia/epidemiology[MESH]
  • |Nucleic Acid Amplification Techniques/methods[MESH]
  • |Real-Time Polymerase Chain Reaction/*methods[MESH]
  • |Recombinases/genetics/metabolism[MESH]
  • |Reverse Transcription/genetics[MESH]
  • |SARS-CoV-2/*genetics/pathogenicity[MESH]


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  • suck abstract from ncbi

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