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10.1371/journal.pcbi.1008444 http://scihub22266oqcxt.onion/10.1371/journal.pcbi.1008444 33206646!7710046!33206646     free     free     free Deprecated: Implicit conversion from float 217.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 217.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 217.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 217.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 217.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 217.6 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534 Deprecated: Implicit conversion from float 251.2 to int loses precision in C:\Inetpub\vhosts\kidney.de\httpdocs\pget.php on line 534       PLoS+Comput+Biol 2020 ; 16 (11): e1008444 Nephropedia Template TP {{tp|p=33206646|t=2020. BioAFMviewer: An interactive interface for simulated AFM scanning of biomolecular structures and dynamics |pdf=|usr=}}{{33206646}} gab.com Text BioAFMviewer: An interactive interface for simulated AFM scanning of biomolecular structures and dynamics JO: PLoS Comput Biol http://www.kidney.de/pget.php?&tw=1&pmid=33206646 #FOAvip We provide a stand-alone software, the BioAFMviewer, which transforms biomolecular structures into the graphical representation corresponding to the outcome of atomic force microscopy (AFM) experiments. The AFM graphics is obtained by performing simulated scanning over the molecular structure encoded in the corresponding PDB file. A versatile molecular viewer integrates the visualization of PDB structures and control over their orientation, while synchronized simulated scanning with variable spatial resolution and tip-shape geometry produces the corresponding AFM graphics. We demonstrate the applicability of the BioAFMviewer by comparing simulated AFM graphics to high-speed AFM observations of proteins. The software can furthermore process molecular movies of conformational motions, e.g. those obtained from servers which model functional transitions within a protein, and produce the corresponding simulated AFM movie. The BioAFMviewer software provides the platform to employ the plethora of structural and dynamical data of proteins in order to help in the interpretation of biomolecular AFM experiments. Twit Text FOAVip BioAFMviewer: An interactive interface for simulated AFM scanning of biomolecular structures and dynamics ????PLoS Comput Biol http://www.kidney.de/pget.php?&tw=1&pmid=33206646 #FOAvip Twit Text # Free Paper on # # # # # LINK http://www.kidney.de/pget.php?&tw=1&pmid=33206646 #FOAvip English Wikipedia <ref>{{Cite pmid|33206646}}</ref> BioAFMviewer: An interactive interface for simulated AFM scanning of biomolecular structures and dynamics #MMPMID33206646 Amyot R; Flechsig H PLoS Comput Biol 2020[Nov]; 16 (11): e1008444 PMID33206646show ga We provide a stand-alone software, the BioAFMviewer, which transforms biomolecular structures into the graphical representation corresponding to the outcome of atomic force microscopy (AFM) experiments. The AFM graphics is obtained by performing simulated scanning over the molecular structure encoded in the corresponding PDB file. A versatile molecular viewer integrates the visualization of PDB structures and control over their orientation, while synchronized simulated scanning with variable spatial resolution and tip-shape geometry produces the corresponding AFM graphics. We demonstrate the applicability of the BioAFMviewer by comparing simulated AFM graphics to high-speed AFM observations of proteins. The software can furthermore process molecular movies of conformational motions, e.g. those obtained from servers which model functional transitions within a protein, and produce the corresponding simulated AFM movie. The BioAFMviewer software provides the platform to employ the plethora of structural and dynamical data of proteins in order to help in the interpretation of biomolecular AFM experiments. |*Software[MESH] |Computational Biology[MESH] |Computer Graphics[MESH] |Computer Simulation[MESH] |Microscopy, Atomic Force/*statistics & numerical data[MESH] |Microscopy, Video/statistics & numerical data[MESH] |Molecular Dynamics Simulation/statistics & numerical data[MESH] |Molecular Structure[MESH] |Motion Pictures[MESH] |Nanotechnology[MESH] |Protein Conformation[MESH] |Proteins/chemistry/ultrastructure[MESH]BioAFMviewer: An interactive interface for simulated AFM scanning of b(epmc).pdf DeepDyve Pubget Overpricing