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10.1038/s41594-020-00536-8

http://scihub22266oqcxt.onion/10.1038/s41594-020-00536-8
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suck abstract from ncbi


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pmid33177698      Nat+Struct+Mol+Biol 2020 ; 27 (12): 1202-1208
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  • Structure and drug binding of the SARS-CoV-2 envelope protein transmembrane domain in lipid bilayers #MMPMID33177698
  • Mandala VS; McKay MJ; Shcherbakov AA; Dregni AJ; Kolocouris A; Hong M
  • Nat Struct Mol Biol 2020[Dec]; 27 (12): 1202-1208 PMID33177698show ga
  • An essential protein of the SARS-CoV-2 virus, the envelope protein E, forms a homopentameric cation channel that is important for virus pathogenicity. Here we report a 2.1-A structure and the drug-binding site of E's transmembrane domain (ETM), determined using solid-state NMR spectroscopy. In lipid bilayers that mimic the endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane, ETM forms a five-helix bundle surrounding a narrow pore. The protein deviates from the ideal alpha-helical geometry due to three phenylalanine residues, which stack within each helix and between helices. Together with valine and leucine interdigitation, these cause a dehydrated pore compared with the viroporins of influenza viruses and HIV. Hexamethylene amiloride binds the polar amino-terminal lumen, whereas acidic pH affects the carboxy-terminal conformation. Thus, the N- and C-terminal halves of this bipartite channel may interact with other viral and host proteins semi-independently. The structure sets the stage for designing E inhibitors as antiviral drugs.
  • |Amantadine/chemistry[MESH]
  • |Amiloride/analogs & derivatives/chemistry[MESH]
  • |Antiviral Agents/chemistry[MESH]
  • |Coronavirus Envelope Proteins/*chemistry/genetics[MESH]
  • |Dimyristoylphosphatidylcholine/chemistry[MESH]
  • |Hydrogen-Ion Concentration[MESH]
  • |Lipid Bilayers/*chemistry[MESH]
  • |Magnetic Resonance Spectroscopy[MESH]
  • |Models, Molecular[MESH]
  • |Phenylalanine/chemistry[MESH]
  • |Phospholipids/chemistry[MESH]
  • |Protein Conformation[MESH]
  • |Protein Domains[MESH]


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