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10.1016/j.bbrc.2020.09.131

http://scihub22266oqcxt.onion/10.1016/j.bbrc.2020.09.131
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suck abstract from ncbi


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pmid33039147      Biochem+Biophys+Res+Commun 2021 ; 538 (ä): 54-62
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  • High-resolution structure and biophysical characterization of the nucleocapsid phosphoprotein dimerization domain from the Covid-19 severe acute respiratory syndrome coronavirus 2 #MMPMID33039147
  • Zinzula L; Basquin J; Bohn S; Beck F; Klumpe S; Pfeifer G; Nagy I; Bracher A; Hartl FU; Baumeister W
  • Biochem Biophys Res Commun 2021[Jan]; 538 (ä): 54-62 PMID33039147show ga
  • Unprecedented by number of casualties and socio-economic burden occurring worldwide, the coronavirus disease 2019 (Covid-19) pandemic caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the worst health crisis of this century. In order to develop adequate countermeasures against Covid-19, identification and structural characterization of suitable antiviral targets within the SARS-CoV-2 protein repertoire is urgently needed. The nucleocapsid phosphoprotein (N) is a multifunctional and highly immunogenic determinant of virulence and pathogenicity, whose main functions consist in oligomerizing and packaging the single-stranded RNA (ssRNA) viral genome. Here we report the structural and biophysical characterization of the SARS-CoV-2 N C-terminal domain (CTD), on which both N homo-oligomerization and ssRNA binding depend. Crystal structures solved at 1.44 A and 1.36 A resolution describe a rhombus-shape N CTD dimer, which stably exists in solution as validated by size-exclusion chromatography coupled to multi-angle light scattering and analytical ultracentrifugation. Differential scanning fluorimetry revealed moderate thermal stability and a tendency towards conformational change. Microscale thermophoresis demonstrated binding to a 7-bp SARS-CoV-2 genomic ssRNA fragment at micromolar affinity. Furthermore, a low-resolution preliminary model of the full-length SARS-CoV N in complex with ssRNA, obtained by cryo-electron microscopy, provides an initial understanding of self-associating and RNA binding functions exerted by the SARS-CoV-2 N.
  • |COVID-19/*virology[MESH]
  • |Coronavirus Nucleocapsid Proteins/*chemistry/genetics[MESH]
  • |Cryoelectron Microscopy[MESH]
  • |Genome, Viral[MESH]
  • |Humans[MESH]
  • |Phosphoproteins/chemistry/genetics[MESH]
  • |Protein Binding[MESH]
  • |Protein Domains[MESH]
  • |Protein Multimerization[MESH]
  • |RNA-Binding Proteins/*chemistry/genetics[MESH]


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