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10.1016/j.humimm.2020.08.001

http://scihub22266oqcxt.onion/10.1016/j.humimm.2020.08.001
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suck abstract from ncbi


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pmid32888767      Hum+Immunol 2020 ; 81 (10-11): 588-595
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  • Conserved HLA binding peptides from five non-structural proteins of SARS-CoV-2-An in silico glance #MMPMID32888767
  • Marchan J
  • Hum Immunol 2020[Oct]; 81 (10-11): 588-595 PMID32888767show ga
  • Coronavirus Disease 2019 (COVID-19) is a dangerous global threat that has no clinically approved treatment yet. Bioinformatics represent an outstanding approach to reveal key immunogenic regions in viral proteins. Here, five severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) non-structural proteins (NSPs) (NSP7, NSP8, NSP9, NSP12, and NSP13) were screened to identify potential human leukocyte antigen (HLA) binding peptides. These peptides showed robust viral antigenicity, immunogenicity, and a marked interaction with HLA alleles. Interestingly, several peptides showed affinity by HLA class I (HLA-I) alleles that commonly activates to natural killer (NK) cells. Notably, HLA biding peptides are conserved among SARS-CoV-2, severe acute respiratory syndrome coronavirus (SARS-CoV), and Middle Eastern respiratory syndrome coronavirus (MERS-CoV). Interestingly, HLA-I and HLA class II (HLA-II) binding peptides induced humoral and cell-mediated responses after in silico vaccination. These results may open further in vitro and in vivo investigations to develop novel therapeutic strategies against coronaviral infections.
  • |Amino Acid Sequence[MESH]
  • |Betacoronavirus/genetics/*immunology[MESH]
  • |COVID-19[MESH]
  • |COVID-19 Vaccines[MESH]
  • |Conserved Sequence/*immunology[MESH]
  • |Coronavirus Infections/blood/*immunology/prevention & control/therapy/virology[MESH]
  • |HLA Antigens/*immunology/metabolism[MESH]
  • |Humans[MESH]
  • |Immunity, Cellular/immunology[MESH]
  • |Immunity, Humoral/immunology[MESH]
  • |Killer Cells, Natural/immunology/metabolism[MESH]
  • |Middle East Respiratory Syndrome Coronavirus/genetics/immunology[MESH]
  • |Molecular Docking Simulation[MESH]
  • |Pandemics[MESH]
  • |Pneumonia, Viral/blood/*immunology/therapy/virology[MESH]
  • |SARS-CoV-2[MESH]
  • |Severe acute respiratory syndrome-related coronavirus/genetics/immunology[MESH]
  • |Vaccines, Subunit/immunology[MESH]
  • |Viral Nonstructural Proteins/genetics/*immunology/metabolism[MESH]


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