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10.1016/j.jmgm.2020.107710

http://scihub22266oqcxt.onion/10.1016/j.jmgm.2020.107710
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32829149!7417922!32829149
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suck abstract from ncbi


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pmid32829149      J+Mol+Graph+Model 2020 ; 100 (ä): 107710
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  • Structural analysis of experimental drugs binding to the SARS-CoV-2 target TMPRSS2 #MMPMID32829149
  • Huggins DJ
  • J Mol Graph Model 2020[Nov]; 100 (ä): 107710 PMID32829149show ga
  • The emergence of SARS-CoV-2 has prompted a worldwide health emergency. There is an urgent need for therapeutics, both through the repurposing of approved drugs and the development of new treatments. In addition to the viral drug targets, a number of human drug targets have been suggested. In theory, targeting human proteins should provide an advantage over targeting viral proteins in terms of drug resistance, which is commonly a problem in treating RNA viruses. This paper focuses on the human protein TMPRSS2, which supports coronavirus life cycles by cleaving viral spike proteins. The three-dimensional structure of TMPRSS2 is not known and so we have generated models of the TMPRSS2 in the apo state as well as in complex with a peptide substrate and putative inhibitors to aid future work. Importantly, many related human proteases have 80% or higher identity with TMPRSS2 in the S1-S1' subsites, with plasminogen and urokinase-type plasminogen activator (uPA) having 95% identity. We highlight 376 approved, investigational or experimental drugs targeting S1A serine proteases that may also inhibit TMPRSS2. Whilst the presence of a relatively uncommon lysine residue in the S2/S3 subsites means that some serine protease inhibitors will not inhibit TMPRSS2, this residue is likely to provide a handle for selective targeting in a focused drug discovery project. We discuss how experimental drugs targeting related serine proteases might be repurposed as TMPRSS2 inhibitors to treat coronaviruses.
  • |Amino Acid Sequence[MESH]
  • |Antiviral Agents/*chemistry[MESH]
  • |Betacoronavirus/*chemistry/enzymology[MESH]
  • |COVID-19[MESH]
  • |Catalytic Domain[MESH]
  • |Coronavirus Infections/drug therapy/virology[MESH]
  • |Drug Repositioning[MESH]
  • |Host-Pathogen Interactions[MESH]
  • |Humans[MESH]
  • |Ligands[MESH]
  • |Molecular Dynamics Simulation[MESH]
  • |Pandemics[MESH]
  • |Plasminogen/antagonists & inhibitors/chemistry/metabolism[MESH]
  • |Pneumonia, Viral/drug therapy/virology[MESH]
  • |Protease Inhibitors/*chemistry[MESH]
  • |Protein Binding[MESH]
  • |Protein Interaction Domains and Motifs[MESH]
  • |Protein Structure, Secondary[MESH]
  • |SARS-CoV-2[MESH]
  • |Sequence Alignment[MESH]
  • |Serine Endopeptidases/*chemistry/metabolism[MESH]
  • |Small Molecule Libraries/*chemistry[MESH]
  • |Structural Homology, Protein[MESH]
  • |Structure-Activity Relationship[MESH]
  • |Thermodynamics[MESH]


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