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10.1371/journal.pone.0237295

http://scihub22266oqcxt.onion/10.1371/journal.pone.0237295
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32756606!7406073!32756606
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suck abstract from ncbi


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pmid32756606      PLoS+One 2020 ; 15 (8): e0237295
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  • Development and simulation of fully glycosylated molecular models of ACE2-Fc fusion proteins and their interaction with the SARS-CoV-2 spike protein binding domain #MMPMID32756606
  • Bernardi A; Huang Y; Harris B; Xiong Y; Nandi S; McDonald KA; Faller R
  • PLoS One 2020[]; 15 (8): e0237295 PMID32756606show ga
  • We develop fully glycosylated computational models of ACE2-Fc fusion proteins which are promising targets for a COVID-19 therapeutic. These models are tested in their interaction with a fragment of the receptor-binding domain (RBD) of the Spike Protein S of the SARS-CoV-2 virus, via atomistic molecular dynamics simulations. We see that some ACE2 glycans interact with the S fragments, and glycans are influencing the conformation of the ACE2 receptor. Additionally, we optimize algorithms for protein glycosylation modelling in order to expedite future model development. All models and algorithms are openly available.
  • |*Molecular Dynamics Simulation[MESH]
  • |Algorithms[MESH]
  • |Angiotensin-Converting Enzyme 2[MESH]
  • |Betacoronavirus/isolation & purification/*metabolism[MESH]
  • |Binding Sites[MESH]
  • |COVID-19[MESH]
  • |Coronavirus Infections/pathology/virology[MESH]
  • |Glycosylation[MESH]
  • |Humans[MESH]
  • |Pandemics[MESH]
  • |Peptidyl-Dipeptidase A/*chemistry/genetics/metabolism[MESH]
  • |Pneumonia, Viral/pathology/virology[MESH]
  • |Protein Structure, Tertiary[MESH]
  • |Recombinant Fusion Proteins/biosynthesis/chemistry/isolation & purification[MESH]
  • |SARS-CoV-2[MESH]


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