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10.1371/journal.pone.0236859

http://scihub22266oqcxt.onion/10.1371/journal.pone.0236859
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32730368!7392263!32730368
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suck abstract from ncbi


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pmid32730368      PLoS+One 2020 ; 15 (7): e0236859
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  • Pooled RNA sample reverse transcriptase real time PCR assay for SARS CoV-2 infection: A reliable, faster and economical method #MMPMID32730368
  • Gupta E; Padhi A; Khodare A; Agarwal R; Ramachandran K; Mehta V; Kilikdar M; Dubey S; Kumar G; Sarin SK
  • PLoS One 2020[]; 15 (7): e0236859 PMID32730368show ga
  • BACKGROUND: Corona virus disease 2019 (COVID-19) which initially started as a cluster of pneumonia cases in the Wuhan city of China has now become a full-blown pandemic. Timely diagnosis of COVID-19 is the key in containing the pandemic and breaking the chain of transmission. In low- and middle-income countries availability of testing kits has become the major bottleneck in testing. Novel methods like pooling of samples are the need of the hour. OBJECTIVE: We undertook this study to evaluate a novel protocol of pooling of RNA samples/elutes in performance of PCR for SARS CoV-2 virus. STUDY DESIGN: Extracted RNA samples were randomly placed in pools of 8 on a 96 well plate. Both individual RNA (ID) and pooled RNA RT-qPCR for the screening E gene were done in the same plate and the positivity for the E gene was seen. RESULTS: The present study demonstrated that pool testing with RNA samples can easily detect even up to a single positive sample with Ct value as high as 38. The present study also showed that the results of pool testing is not affected by number of positive samples in a pool. CONCLUSION: Pooling of RNA samples can reduce the time and expense, and can help expand diagnostic capabilities, especially during constrained supply of reagents and PCR kits for the diagnosis of SARS-CoV-2 infection.
  • |Betacoronavirus/*genetics[MESH]
  • |COVID-19[MESH]
  • |Coronavirus Envelope Proteins[MESH]
  • |Coronavirus Infections/*diagnosis/*epidemiology/virology[MESH]
  • |Diagnostic Tests, Routine/economics/methods[MESH]
  • |Humans[MESH]
  • |India/epidemiology[MESH]
  • |Mass Screening/economics/methods[MESH]
  • |Pandemics[MESH]
  • |Pneumonia, Viral/*diagnosis/*epidemiology/virology[MESH]
  • |Prospective Studies[MESH]
  • |RNA, Viral/*genetics/isolation & purification[MESH]
  • |Real-Time Polymerase Chain Reaction/economics/*methods[MESH]
  • |Reproducibility of Results[MESH]
  • |Reverse Transcriptase Polymerase Chain Reaction/economics/*methods[MESH]
  • |SARS-CoV-2[MESH]


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