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10.1038/s41467-020-17496-8

http://scihub22266oqcxt.onion/10.1038/s41467-020-17496-8
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32709886!7381649!32709886
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suck abstract from ncbi


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pmid32709886      Nat+Commun 2020 ; 11 (1): 3718
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  • Structural basis of RNA cap modification by SARS-CoV-2 #MMPMID32709886
  • Viswanathan T; Arya S; Chan SH; Qi S; Dai N; Misra A; Park JG; Oladunni F; Kovalskyy D; Hromas RA; Martinez-Sobrido L; Gupta YK
  • Nat Commun 2020[Jul]; 11 (1): 3718 PMID32709886show ga
  • The severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2), the causative agent of COVID-19 illness, has caused millions of infections worldwide. In SARS coronaviruses, the non-structural protein 16 (nsp16), in conjunction with nsp10, methylates the 5'-end of virally encoded mRNAs to mimic cellular mRNAs, thus protecting the virus from host innate immune restriction. We report here the high-resolution structure of a ternary complex of SARS-CoV-2 nsp16 and nsp10 in the presence of cognate RNA substrate analogue and methyl donor, S-adenosyl methionine (SAM). The nsp16/nsp10 heterodimer is captured in the act of 2'-O methylation of the ribose sugar of the first nucleotide of SARS-CoV-2 mRNA. We observe large conformational changes associated with substrate binding as the enzyme transitions from a binary to a ternary state. This induced fit model provides mechanistic insights into the 2'-O methylation of the viral mRNA cap. We also discover a distant (25 A) ligand-binding site unique to SARS-CoV-2, which can alternatively be targeted, in addition to RNA cap and SAM pockets, for antiviral development.
  • |Betacoronavirus[MESH]
  • |COVID-19[MESH]
  • |Coronavirus Infections/virology[MESH]
  • |Humans[MESH]
  • |Methyltransferases/*chemistry/metabolism[MESH]
  • |Models, Chemical[MESH]
  • |Models, Molecular[MESH]
  • |Pandemics[MESH]
  • |Pneumonia, Viral/virology[MESH]
  • |RNA Caps/*metabolism[MESH]
  • |RNA, Viral/metabolism[MESH]
  • |S-Adenosylmethionine/metabolism[MESH]
  • |SARS-CoV-2[MESH]
  • |Viral Nonstructural Proteins/*chemistry/metabolism[MESH]
  • |Viral Regulatory and Accessory Proteins/*chemistry/metabolism[MESH]


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