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10.1016/j.jviromet.2020.113937

http://scihub22266oqcxt.onion/10.1016/j.jviromet.2020.113937
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32659241!7351060!32659241
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suck abstract from ncbi


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pmid32659241      J+Virol+Methods 2020 ; 284 (ä): 113937
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  • Capillary electrophoresis of PCR fragments with 5 -labelled primers for testing the SARS-Cov-2 #MMPMID32659241
  • Gomez J; Melon S; Boga JA; Alvarez-Arguelles ME; Rojo-Alba S; Leal-Negredo A; Castello-Abietar C; Alvarez V; Cuesta-Llavona E; Coto E
  • J Virol Methods 2020[Oct]; 284 (ä): 113937 PMID32659241show ga
  • Due to the huge demand for SARS-Cov-2 determination,alternatives to the standard qtPCRtestsare potentially useful for increasing the number of samples screened. Our aim was to develop a direct fluorescent PCR capillary-electrophoresis detection of the viral genome. We validated this approach on several SARS-Cov-2 positive and negative samples.We isolated the naso-pharingealRNA from 20 positive and 10 negative samples. The cDNA was synthesised and two fragments of the SARS-Cov-2 were amplified. One of the primers for each pair was 5 -end fluorochrome labelled. The amplifications were subjected to capillary electrophoresis in ABI3130 sequencers to visualize the fluorescent peaks.The two SARS-Cov-2 fragments were successfully amplified in the positive samples, while the negative samples did not render fluorescent peaks. In conclusion, we describe and alternative method to identify the SARS-Cov-2 genome that could be scaled to the analysis of approximately 100 samples in less than 5 h. By combining a standard PCR with capillary electrophoresis our approach would overcome the limits imposed to many labs by the qtPCR and increase the testing capacity.
  • |Base Sequence[MESH]
  • |Betacoronavirus/genetics/*isolation & purification[MESH]
  • |COVID-19[MESH]
  • |COVID-19 Testing[MESH]
  • |Clinical Laboratory Techniques/*methods[MESH]
  • |Coronavirus Infections/diagnosis/*virology[MESH]
  • |DNA Primers/genetics[MESH]
  • |DNA, Complementary/genetics[MESH]
  • |Electrophoresis, Capillary/*methods[MESH]
  • |Genome, Viral[MESH]
  • |Humans[MESH]
  • |Nucleic Acid Amplification Techniques/methods[MESH]
  • |Pandemics[MESH]
  • |Pneumonia, Viral/diagnosis/*virology[MESH]
  • |Polymerase Chain Reaction/*methods[MESH]
  • |SARS-CoV-2[MESH]


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