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10.1016/j.bpc.2020.106420

http://scihub22266oqcxt.onion/10.1016/j.bpc.2020.106420
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32622243!7322478!32622243
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suck abstract from ncbi


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pmid32622243      Biophys+Chem 2020 ; 264 (ä): 106420
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  • Delving deep into the structural aspects of a furin cleavage site inserted into the spike protein of SARS-CoV-2: A structural biophysical perspective #MMPMID32622243
  • Li W
  • Biophys Chem 2020[Sep]; 264 (ä): 106420 PMID32622243show ga
  • One notable feature of the SARS-CoV-2 genome, the spike (S) protein of SARS-CoV-2 has a polybasic furin cleavage site (FCS) at its S1-S2 boundary through the insertion of 12 nucleotides encoding four amino acid residues PRRA. Quite intriguingly, this polybasic FCS is absent in coronaviruses of the same clade as SARS-CoV-2. Thus, with currently available experimental structural data for S protein, this short article presents a set of comprehensive structural characterization of the insertion of FCS into S protein, and argues against a hypothesis of the origin of SARS-CoV-2 from purposeful manipulation: (1), the inserted FCS is spatially located at a random coil loop region, mostly distantly solvent-exposed (instead of deeply buried), with no structural proximity to the other part of the S protein; (2), the insertion of FCS itself does not alter, neither stabilize nor de-stabilize, the three-dimensional structure of S; (3), the net result here is the insertion of a furin cleavage site into S protein, whose S1 and S2 subunits will still be strongly electrostatically bonded together from a structural and biophysical point of view, even if the polybasic FCS is actually cleaved by furin protease before or after viral cell entry.
  • |Amino Acid Sequence[MESH]
  • |Betacoronavirus/*chemistry/genetics[MESH]
  • |Furin/*chemistry[MESH]
  • |Gene Expression[MESH]
  • |Humans[MESH]
  • |Hydrogen Bonding[MESH]
  • |Models, Molecular[MESH]
  • |Protein Conformation, alpha-Helical[MESH]
  • |Protein Conformation, beta-Strand[MESH]
  • |Protein Interaction Domains and Motifs[MESH]
  • |Proteolysis[MESH]
  • |SARS-CoV-2[MESH]
  • |Spike Glycoprotein, Coronavirus/*chemistry/genetics/metabolism[MESH]


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