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10.1063/5.0013029

http://scihub22266oqcxt.onion/10.1063/5.0013029
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32611087!7286701!32611087
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suck abstract from ncbi

pmid32611087      Chaos 2020 ; 30 (6): 061102
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  • Topological analysis of SARS CoV-2 main protease #MMPMID32611087
  • Estrada E
  • Chaos 2020[Jun]; 30 (6): 061102 PMID32611087show ga
  • There is an urgent necessity of effective medication against severe acute respiratory syndrome coronavirus 2 (SARS CoV-2), which is producing the COVID-19 pandemic across the world. Its main protease (M(pro)) represents an attractive pharmacological target due to its involvement in essential viral functions. The crystal structure of free M(pro) shows a large structural resemblance with the main protease of SARS CoV (nowadays known as SARS CoV-1). Here, we report that average SARS CoV-2 M(pro) is 1900% more sensitive than SARS CoV-1 M(pro) in transmitting tiny structural changes across the whole protein through long-range interactions. The largest sensitivity of M(pro) to structural perturbations is located exactly around the catalytic site Cys-145 and coincides with the binding site of strong inhibitors. These findings, based on a simplified representation of the protein as a residue network, may help in designing potent inhibitors of SARS CoV-2 M(pro).
  • |Amino Acid Sequence[MESH]
  • |Betacoronavirus/*metabolism[MESH]
  • |Binding Sites/drug effects[MESH]
  • |COVID-19[MESH]
  • |Catalytic Domain/*drug effects[MESH]
  • |Coronavirus 3C Proteases[MESH]
  • |Coronavirus Infections/*drug therapy[MESH]
  • |Crystallography, X-Ray[MESH]
  • |Cysteine Endopeptidases/drug effects/*metabolism[MESH]
  • |Drug Design[MESH]
  • |Humans[MESH]
  • |Pandemics[MESH]
  • |Pneumonia, Viral/*drug therapy[MESH]
  • |Protease Inhibitors/*pharmacology[MESH]
  • |SARS-CoV-2[MESH]
  • |Severe acute respiratory syndrome-related coronavirus/metabolism[MESH]


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