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10.1016/j.cell.2020.05.034

http://scihub22266oqcxt.onion/10.1016/j.cell.2020.05.034
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suck abstract from ncbi


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pmid32526208      Cell 2020 ; 182 (2): 417-428.e13
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  • Structural Basis for RNA Replication by the SARS-CoV-2 Polymerase #MMPMID32526208
  • Wang Q; Wu J; Wang H; Gao Y; Liu Q; Mu A; Ji W; Yan L; Zhu Y; Zhu C; Fang X; Yang X; Huang Y; Gao H; Liu F; Ge J; Sun Q; Yang X; Xu W; Liu Z; Yang H; Lou Z; Jiang B; Guddat LW; Gong P; Rao Z
  • Cell 2020[Jul]; 182 (2): 417-428.e13 PMID32526208show ga
  • Nucleotide analog inhibitors, including broad-spectrum remdesivir and favipiravir, have shown promise in in vitro assays and some clinical studies for COVID-19 treatment, this despite an incomplete mechanistic understanding of the viral RNA-dependent RNA polymerase nsp12 drug interactions. Here, we examine the molecular basis of SARS-CoV-2 RNA replication by determining the cryo-EM structures of the stalled pre- and post- translocated polymerase complexes. Compared with the apo complex, the structures show notable structural rearrangements happening to nsp12 and its co-factors nsp7 and nsp8 to accommodate the nucleic acid, whereas there are highly conserved residues in nsp12, positioning the template and primer for an in-line attack on the incoming nucleotide. Furthermore, we investigate the inhibition mechanism of the triphosphate metabolite of remdesivir through structural and kinetic analyses. A transition model from the nsp7-nsp8 hexadecameric primase complex to the nsp12-nsp7-nsp8 polymerase complex is also proposed to provide clues for the understanding of the coronavirus transcription and replication machinery.
  • |Adenosine Monophosphate/analogs & derivatives/chemistry/metabolism/pharmacology[MESH]
  • |Alanine/analogs & derivatives/chemistry/metabolism/pharmacology[MESH]
  • |Antiviral Agents/chemistry/metabolism/pharmacology[MESH]
  • |Betacoronavirus/*chemistry/*enzymology[MESH]
  • |Catalytic Domain[MESH]
  • |Coronavirus RNA-Dependent RNA Polymerase[MESH]
  • |Cryoelectron Microscopy[MESH]
  • |Models, Chemical[MESH]
  • |Models, Molecular[MESH]
  • |RNA, Viral/metabolism[MESH]
  • |RNA-Dependent RNA Polymerase/*chemistry[MESH]
  • |SARS-CoV-2[MESH]
  • |Transcription, Genetic[MESH]
  • |Viral Nonstructural Proteins/*chemistry[MESH]


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