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10.1038/s41467-020-16234-4

http://scihub22266oqcxt.onion/10.1038/s41467-020-16234-4
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32451382!7248106!32451382
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suck abstract from ncbi


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pmid32451382      Nat+Commun 2020 ; 11 (1): 2605
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  • Stringent control of the RNA-dependent RNA polymerase translocation revealed by multiple intermediate structures #MMPMID32451382
  • Wang M; Li R; Shu B; Jing X; Ye HQ; Gong P
  • Nat Commun 2020[May]; 11 (1): 2605 PMID32451382show ga
  • Each polymerase nucleotide addition cycle is associated with two primary conformational changes of the catalytic complex: the pre-chemistry active site closure and post-chemistry translocation. While active site closure is well interpreted by numerous crystallographic snapshots, translocation intermediates are rarely captured. Here we report three types of intermediate structures in an RNA-dependent RNA polymerase (RdRP). The first two types, captured in forward and reverse translocation events, both highlight the role of RdRP-unique motif G in restricting the RNA template movement, corresponding to the rate-limiting step in translocation. By mutating two critical residues in motif G, we obtain the third type of intermediates that may mimic the transition state of this rate-limiting step, demonstrating a previously unidentified movement of the template strand. We propose that a similar strategy may be utilized by other classes of nucleic acid polymerases to ensure templating nucleotide positioning for efficient catalysis through restricting interactions with template RNA.
  • |Amino Acid Motifs[MESH]
  • |Amino Acid Sequence[MESH]
  • |Amino Acid Substitution[MESH]
  • |Base Sequence[MESH]
  • |Biological Transport, Active[MESH]
  • |Catalytic Domain[MESH]
  • |Crystallography, X-Ray[MESH]
  • |Enterovirus A, Human/enzymology/genetics[MESH]
  • |Genes, Viral[MESH]
  • |Humans[MESH]
  • |Models, Molecular[MESH]
  • |Mutagenesis, Site-Directed[MESH]
  • |Nucleic Acid Conformation[MESH]
  • |Protein Conformation[MESH]
  • |RNA, Viral/chemistry/genetics/metabolism[MESH]
  • |RNA-Dependent RNA Polymerase/*chemistry/genetics/*metabolism[MESH]
  • |Transcription Elongation, Genetic[MESH]


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