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10.1016/j.mcp.2020.101599

http://scihub22266oqcxt.onion/10.1016/j.mcp.2020.101599
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32425334!7233248!32425334
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suck abstract from ncbi


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pmid32425334      Mol+Cell+Probes 2020 ; 53 (ä): 101599
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  • Sequence mismatch in PCR probes may mask the COVID-19 detection in Nepal #MMPMID32425334
  • Rana DR; Pokhrel N
  • Mol Cell Probes 2020[Oct]; 53 (ä): 101599 PMID32425334show ga
  • *Most of the COVID-19 cases in Nepal are in the Southern districts of Nepal bordering India with travel histories to India.*Very few positive cases of COVID-19 are detected in Nepal which could either be due to early national lockdown.*Low PCR positivity rates could also be due to inefficiency of the PCR methods.*Whole genomes of 93 clinical samples from COVID-19 patients were analyzed to find the primer and probe binding sites.*Mutations in probe binding sites were found which could impact PCR efficiency resulting in false negative results.
  • |*Genome, Viral[MESH]
  • |*Pandemics[MESH]
  • |Betacoronavirus/classification/*genetics/pathogenicity[MESH]
  • |COVID-19[MESH]
  • |COVID-19 Testing[MESH]
  • |Clinical Laboratory Techniques/methods[MESH]
  • |Coronavirus Infections/*diagnosis/*epidemiology/transmission/virology[MESH]
  • |DNA Probes/standards[MESH]
  • |False Negative Reactions[MESH]
  • |Humans[MESH]
  • |India/epidemiology[MESH]
  • |Mutation[MESH]
  • |Nepal/epidemiology[MESH]
  • |Pneumonia, Viral/*diagnosis/*epidemiology/transmission/virology[MESH]
  • |RNA, Viral/*genetics[MESH]
  • |Reagent Kits, Diagnostic/standards[MESH]
  • |Reverse Transcriptase Polymerase Chain Reaction/*standards[MESH]
  • |SARS-CoV-2[MESH]
  • |Severity of Illness Index[MESH]


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