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10.1016/j.cell.2020.04.007 http://scihub22266oqcxt.onion/10.1016/j.cell.2020.04.007 32386544!8152789!32386544     free     free     free       Cell 2020 ; 181 (4): 936-953.e20 Nephropedia Template TP {{tp|p=32386544|t=2020. The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas |pdf=|usr=}}{{32386544}} gab.com Text The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas JO: Cell http://www.kidney.de/pget.php?&tw=1&pmid=32386544 #FOAvip Recent large-scale collaborations are generating major surveys of cell types and connections in the mouse brain, collecting large amounts of data across modalities, spatial scales, and brain areas. Successful integration of these data requires a standard 3D reference atlas. Here, we present the Allen Mouse Brain Common Coordinate Framework (CCFv3) as such a resource. We constructed an average template brain at 10 mum voxel resolution by interpolating high resolution in-plane serial two-photon tomography images with 100 mum z-sampling from 1,675 young adult C57BL/6J mice. Then, using multimodal reference data, we parcellated the entire brain directly in 3D, labeling every voxel with a brain structure spanning 43 isocortical areas and their layers, 329 subcortical gray matter structures, 81 fiber tracts, and 8 ventricular structures. CCFv3 can be used to analyze, visualize, and integrate multimodal and multiscale datasets in 3D and is openly accessible (https://atlas.brain-map.org/). Twit Text FOAVip The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas ????Cell http://www.kidney.de/pget.php?&tw=1&pmid=32386544 #FOAvip Twit Text # Free Paper on # # # # # LINK http://www.kidney.de/pget.php?&tw=1&pmid=32386544 #FOAvip English Wikipedia <ref>{{Cite pmid|32386544}}</ref> The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas #MMPMID32386544 Wang Q; Ding SL; Li Y; Royall J; Feng D; Lesnar P; Graddis N; Naeemi M; Facer B; Ho A; Dolbeare T; Blanchard B; Dee N; Wakeman W; Hirokawa KE; Szafer A; Sunkin SM; Oh SW; Bernard A; Phillips JW; Hawrylycz M; Koch C; Zeng H; Harris JA; Ng L Cell 2020[May]; 181 (4): 936-953.e20 PMID32386544show ga Recent large-scale collaborations are generating major surveys of cell types and connections in the mouse brain, collecting large amounts of data across modalities, spatial scales, and brain areas. Successful integration of these data requires a standard 3D reference atlas. Here, we present the Allen Mouse Brain Common Coordinate Framework (CCFv3) as such a resource. We constructed an average template brain at 10 mum voxel resolution by interpolating high resolution in-plane serial two-photon tomography images with 100 mum z-sampling from 1,675 young adult C57BL/6J mice. Then, using multimodal reference data, we parcellated the entire brain directly in 3D, labeling every voxel with a brain structure spanning 43 isocortical areas and their layers, 329 subcortical gray matter structures, 81 fiber tracts, and 8 ventricular structures. CCFv3 can be used to analyze, visualize, and integrate multimodal and multiscale datasets in 3D and is openly accessible (https://atlas.brain-map.org/). |Animals[MESH] |Atlases as Topic[MESH] |Brain Mapping/methods[MESH] |Brain/*anatomy & histology/*metabolism/*physiology[MESH] |Image Processing, Computer-Assisted/methods[MESH] |Imaging, Three-Dimensional/methods[MESH] |Male[MESH] |Mice[MESH]The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atla(epmc).pdf DeepDyve Pubget Overpricing