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10.1021/acs.jmedchem.9b01913

http://scihub22266oqcxt.onion/10.1021/acs.jmedchem.9b01913
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32105468!ä!32105468

suck abstract from ncbi


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pmid32105468      J+Med+Chem 2020 ; 63 (6): 3131-3141
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  • Structure-Based Stabilization of Non-native Protein-Protein Interactions of Coronavirus Nucleocapsid Proteins in Antiviral Drug Design #MMPMID32105468
  • Lin SM; Lin SC; Hsu JN; Chang CK; Chien CM; Wang YS; Wu HY; Jeng US; Kehn-Hall K; Hou MH
  • J Med Chem 2020[Mar]; 63 (6): 3131-3141 PMID32105468show ga
  • Structure-based stabilization of protein-protein interactions (PPIs) is a promising strategy for drug discovery. However, this approach has mainly focused on the stabilization of native PPIs, and non-native PPIs have received little consideration. Here, we identified a non-native interaction interface on the three-dimensional dimeric structure of the N-terminal domain of the MERS-CoV nucleocapsid protein (MERS-CoV N-NTD). The interface formed a conserved hydrophobic cavity suitable for targeted drug screening. By considering the hydrophobic complementarity during the virtual screening step, we identified 5-benzyloxygramine as a new N protein PPI orthosteric stabilizer that exhibits both antiviral and N-NTD protein-stabilizing activities. X-ray crystallography and small-angle X-ray scattering showed that 5-benzyloxygramine stabilizes the N-NTD dimers through simultaneous hydrophobic interactions with both partners, resulting in abnormal N protein oligomerization that was further confirmed in the cell. This unique approach based on the identification and stabilization of non-native PPIs of N protein could be applied toward drug discovery against CoV diseases.
  • |Alkaloids/chemistry/metabolism/*pharmacology[MESH]
  • |Amino Acid Sequence[MESH]
  • |Animals[MESH]
  • |Antiviral Agents/chemistry/metabolism/*pharmacology[MESH]
  • |Chlorocebus aethiops[MESH]
  • |Coronavirus Nucleocapsid Proteins[MESH]
  • |Crystallography, X-Ray[MESH]
  • |Drug Design[MESH]
  • |Hydrophobic and Hydrophilic Interactions[MESH]
  • |Indoles/chemistry/metabolism/*pharmacology[MESH]
  • |Middle East Respiratory Syndrome Coronavirus/chemistry/drug effects[MESH]
  • |Molecular Docking Simulation[MESH]
  • |Nucleocapsid Proteins/chemistry/*metabolism[MESH]
  • |Protein Binding[MESH]
  • |Protein Domains[MESH]
  • |Protein Multimerization/*drug effects[MESH]
  • |Sequence Alignment[MESH]


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