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10.1186/s12967-019-2116-8

http://scihub22266oqcxt.onion/10.1186/s12967-019-2116-8
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suck abstract from ncbi


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pmid31703698      J+Transl+Med 2019 ; 17 (1): 362
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  • Epitope-based peptide vaccine design and target site depiction against Middle East Respiratory Syndrome Coronavirus: an immune-informatics study #MMPMID31703698
  • Tahir Ul Qamar M; Saleem S; Ashfaq UA; Bari A; Anwar F; Alqahtani S
  • J Transl Med 2019[Nov]; 17 (1): 362 PMID31703698show ga
  • BACKGROUND: Middle East Respiratory Syndrome Coronavirus (MERS-COV) is the main cause of lung and kidney infections in developing countries such as Saudi Arabia and South Korea. This infectious single-stranded, positive (+) sense RNA virus enters the host by binding to dipeptidyl-peptide receptors. Since no vaccine is yet available for MERS-COV, rapid case identification, isolation, and infection prevention strategies must be used to combat the spreading of MERS-COV infection. Additionally, there is a desperate need for vaccines and antiviral strategies. METHODS: The present study used immuno-informatics and computational approaches to identify conserved B- and T cell epitopes for the MERS-COV spike (S) protein that may perform a significant role in eliciting the resistance response to MERS-COV infection. RESULTS: Many conserved cytotoxic T-lymphocyte epitopes and discontinuous and linear B-cell epitopes were predicted for the MERS-COV S protein, and their antigenicity and interactions with the human leukocyte antigen (HLA) B7 allele were estimated. Among B-cell epitopes, QLQMGFGITVQYGT displayed the highest antigenicity-score, and was immensely immunogenic. Among T-cell epitopes, MHC class-I peptide YKLQPLTFL and MHC class-II peptide YCILEPRSG were identified as highly antigenic. Furthermore, docking analyses revealed that the predicted peptides engaged in strong bonding with the HLA-B7 allele. CONCLUSION: The present study identified several MERS-COV S protein epitopes that are conserved among various isolates from different countries. The putative antigenic epitopes may prove effective as novel vaccines for eradication and combating of MERS-COV infection.
  • |Amino Acid Sequence[MESH]
  • |Antigens, Viral/chemistry/genetics/immunology[MESH]
  • |Coronavirus Infections/*immunology/*prevention & control/virology[MESH]
  • |Epitopes, B-Lymphocyte/chemistry/genetics/immunology[MESH]
  • |Epitopes, T-Lymphocyte/chemistry/genetics/immunology[MESH]
  • |Genome, Viral[MESH]
  • |HLA Antigens/chemistry/genetics[MESH]
  • |Host Microbial Interactions/genetics/immunology[MESH]
  • |Humans[MESH]
  • |Middle East Respiratory Syndrome Coronavirus/chemistry/genetics/*immunology[MESH]
  • |Models, Molecular[MESH]
  • |Molecular Docking Simulation[MESH]
  • |Republic of Korea[MESH]
  • |Saudi Arabia[MESH]
  • |Spike Glycoprotein, Coronavirus/chemistry/genetics/immunology[MESH]
  • |Translational Research, Biomedical[MESH]
  • |Vaccines, Subunit/chemistry/genetics/immunology[MESH]


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