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10.1016/j.bbrc.2019.09.115

http://scihub22266oqcxt.onion/10.1016/j.bbrc.2019.09.115
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31594639!7092827!31594639
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suck abstract from ncbi


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pmid31594639      Biochem+Biophys+Res+Commun 2019 ; 520 (3): 499-506
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  • An in vivo cell-based assay for investigating the specific interaction between the SARS-CoV N-protein and its viral RNA packaging sequence #MMPMID31594639
  • Woo J; Lee EY; Lee M; Kim T; Cho YE
  • Biochem Biophys Res Commun 2019[Dec]; 520 (3): 499-506 PMID31594639show ga
  • The SARS-CoV nucleocapsid (N) protein serves multiple functions in viral replication, transcription, and assembly of the viral genome complex. Coronaviruses specifically package genomic RNA into assembled virions, and in SARS-CoV, it is reported that this process is driven by an interaction between the N-protein and a packaging signal encoded within the viral RNA. While recent studies have uncovered the sequence of this packaging signal, little is known about the specific interaction between the N-protein and the packaging signal sequence, and the mechanisms by which this interaction drives viral genome packaging. In this study, we developed a novel in vivo cell-based assay for examining this interaction between the N-protein and packaging signal RNA for SARS-CoV, as well as other viruses within the coronaviridae family. Our results demonstrate that the N-protein specifically recognizes the SARS-CoV packaging signal with greater affinity compared to signals from other coronaviruses or non-coronavirus species. We also use deletion mapping to identify a 151-nt region within the packaging signal sequence that is critical for N-protein-RNA binding, and conversely, we show that both the N-terminal and C-terminal domains of the N protein are necessary for recognizing the packaging RNA. These results describe, for the first time, in vivo evidence for an interaction between the SARS-CoV N-protein and its packaging signal RNA, and demonstrate the feasibility of using this cell-based assay to further probe viral RNA-protein interactions in future studies.
  • |Animals[MESH]
  • |Base Sequence[MESH]
  • |Binding Sites[MESH]
  • |Biological Assay/*methods[MESH]
  • |Chlorocebus aethiops[MESH]
  • |Coronavirus Nucleocapsid Proteins[MESH]
  • |Murine hepatitis virus/genetics[MESH]
  • |Nucleocapsid Proteins/chemistry/*metabolism[MESH]
  • |RNA, Viral/*genetics/*metabolism[MESH]
  • |Sequence Deletion/genetics[MESH]
  • |Severe acute respiratory syndrome-related coronavirus/*genetics/*metabolism[MESH]
  • |Vero Cells[MESH]


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