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10.1002/jmv.24492

http://scihub22266oqcxt.onion/10.1002/jmv.24492
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26856438!7166946!26856438
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suck abstract from ncbi


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pmid26856438      J+Med+Virol 2016 ; 88 (8): 1319-24
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  • Comparing Luminex NxTAG-Respiratory Pathogen Panel and RespiFinder-22 for multiplex detection of respiratory pathogens #MMPMID26856438
  • Beckmann C; Hirsch HH
  • J Med Virol 2016[Aug]; 88 (8): 1319-24 PMID26856438show ga
  • Respiratory tract infection (RTI) involves a variety of viruses and bacteria, which can be conveniently detected by multiplex nucleic acid amplification testing (NAT). To compare the novel Luminex-based NxTAG-Respiratory Pathogen Panel (NxTAG-RPP) with the routine multiplex-ligation-NAT based RespiFinder-22(R) (RF-22), 282 respiratory specimens including nasopharyngeal swabs (71%), broncho-alveolar lavage (27%), throat swabs, tracheal secretions, and sputum (2%) from 116 children and 155 adults were extracted using a Corbett CAS1200 (Qiagen), and analyzed in parallel by the routine RF-22 and NxTAG-RPP. Concordant results were obtained in 263 (93.3%) cases consisting of concordant positives in 167 (59.2%) and concordant negatives in 96 (34%). Results were discordant in 19 (6.7%) consisting of 15 positive:negative, and 4 negative:positive results by NxTAG-RPP versus RF-22, respectively. Co-infections were observed in 10.3% with NxTAG-RPP and in 5.9% with RF-22. Most additional viral pathogens identified by the NxTAG-RPP involved dual infections with rhinovirus and RSV. Discordant samples were mainly due to low genome signals of Ct less than 36, when retested by QNAT suggesting a higher sensitivity of the NxTAG-RPP, also when detecting multiple infections. Hands-on time after extraction for 24 and 96 samples was 0.25 and <0.5 hr for the NxTAG-RPP, and 2 and 4 hr for the RF-22, respectively. The median turn-around time was 6 hr (range 5-7 hr) for NxTAG-RPP and 12 hr (range 8-16 hr) for RF-22. The NxTAG-RPP showed comparable detection rates for most respiratory pathogens, while hands-on and turn-around time were considerably shorter. The clinical significance of detecting multiple viruses needs further clinical evaluation. J. Med. Virol. 88:1319-1324, 2016. (c) 2016 Wiley Periodicals, Inc.
  • |*Multiplex Polymerase Chain Reaction/methods[MESH]
  • |Aged[MESH]
  • |Bronchoalveolar Lavage Fluid/virology[MESH]
  • |Child, Preschool[MESH]
  • |Coinfection/diagnosis/virology[MESH]
  • |Female[MESH]
  • |Humans[MESH]
  • |Infant[MESH]
  • |Infant, Newborn[MESH]
  • |Male[MESH]
  • |Middle Aged[MESH]
  • |Molecular Diagnostic Techniques/methods/standards[MESH]
  • |Nasopharynx/virology[MESH]
  • |Reagent Kits, Diagnostic[MESH]
  • |Respiratory Tract Infections/*diagnosis/virology[MESH]
  • |Retrospective Studies[MESH]
  • |Rhinovirus/genetics/pathogenicity[MESH]
  • |Sensitivity and Specificity[MESH]
  • |Sputum/virology[MESH]
  • |Time Factors[MESH]
  • |Trachea/virology[MESH]
  • |Virus Diseases/*diagnosis/virology[MESH]


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