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10.1016/j.ajhg.2010.01.021

http://scihub22266oqcxt.onion/10.1016/j.ajhg.2010.01.021
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suck abstract from ncbi


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pmid20159108      Am+J+Hum+Genet 2010 ; 86 (2): 109-12
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  • Mapping allele-specific DNA methylation: a new tool for maximizing information from GWAS #MMPMID20159108
  • Tycko B
  • Am J Hum Genet 2010[Feb]; 86 (2): 109-12 PMID20159108show ga
  • In this issue of The Journal, an article by Schalkwyk et al.(1) shows the landscape of allele-specific DNA methylation (ASM) in the human genome. ASM has long been studied as a hallmark of imprinted genes, and a chromosome-wide version of this phenomenon occurs, in a random fashion, during X chromosome inactivation in female cells. But the type of ASM motivating the study by Schalkwyk et al. is different. They used a high-resolution, methylation-sensitive SNP array (MSNP) method for genome-wide profiling of ASM in total peripheral-blood leukocytes (PBL) and buccal cells from a series of monozygotic twin pairs. Their data bring a new level of detail to our knowledge of a newly recognized phenomenon-nonimprinted, sequence-dependent ASM. They document the widespread occurrence of this phenomenon among human genes and discuss its basic implications for gene regulation and genetic-epigenetic interactions. But this paper and recent work from other laboratories(2,3) raises the possibility of a more immediate and practical application for ASM mapping, namely to help extract maximum information from genome-wide association studies.
  • |*Alleles[MESH]
  • |*Chromosome Mapping[MESH]
  • |Animals[MESH]
  • |Base Sequence[MESH]
  • |DNA Methylation/*genetics[MESH]
  • |Epigenesis, Genetic[MESH]
  • |Genome-Wide Association Study/*methods[MESH]
  • |Humans[MESH]
  • |Mice[MESH]


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