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2014 ; 24
(18
): 2189-2194
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Pulsatile dynamics in the yeast proteome
#MMPMID25220054
Dalal CK
; Cai L
; Lin Y
; Rahbar K
; Elowitz MB
Curr Biol
2014[Sep]; 24
(18
): 2189-2194
PMID25220054
show ga
The activation of transcription factors in response to environmental conditions
is fundamental to cellular regulation. Recent work has revealed that some
transcription factors are activated in stochastic pulses of nuclear localization,
rather than at a constant level, even in a constant environment [1-12]. In such
cases, signals control the mean activity of the transcription factor by
modulating the frequency, duration, or amplitude of these pulses. Although
specific pulsatile transcription factors have been identified in diverse cell
types, it has remained unclear how prevalent pulsing is within the cell, how
variable pulsing behaviors are between genes, and whether pulsing is specific to
transcriptional regulators or is employed more broadly. To address these issues,
we performed a proteome-wide movie-based screen to systematically identify
localization-based pulsing behaviors in Saccharomyces cerevisiae. The screen
examined all genes in a previously developed fluorescent protein fusion library
of 4,159 strains [13] in multiple media conditions. This approach revealed
stochastic pulsing in ten proteins, all transcription factors. In each case,
pulse dynamics were heterogeneous and unsynchronized among cells in clonal
populations. Pulsing is the only dynamic localization behavior that we observed,
and it tends to occur in pairs of paralogous and redundant proteins. Taken
together, these results suggest that pulsatile dynamics play a pervasive role in
yeast and may be similarly prevalent in other eukaryotic species.