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2017 ; 14
(3
): 263-266
Nephropedia Template TP
Ramani V
; Deng X
; Qiu R
; Gunderson KL
; Steemers FJ
; Disteche CM
; Noble WS
; Duan Z
; Shendure J
Nat Methods
2017[Mar]; 14
(3
): 263-266
PMID28135255
show ga
We present single-cell combinatorial indexed Hi-C (sciHi-C), a method that
applies combinatorial cellular indexing to chromosome conformation capture. In
this proof of concept, we generate and sequence six sciHi-C libraries comprising
a total of 10,696 single cells. We use sciHi-C data to separate cells by
karyotypic and cell-cycle state differences and identify cell-to-cell
heterogeneity in mammalian chromosomal conformation. Our results demonstrate that
combinatorial indexing is a generalizable strategy for single-cell genomics.