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2016 ; 32
(21
): 3366-3368
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BioNetGen 2 2: advances in rule-based modeling
#MMPMID27402907
Harris LA
; Hogg JS
; Tapia JJ
; Sekar JA
; Gupta S
; Korsunsky I
; Arora A
; Barua D
; Sheehan RP
; Faeder JR
Bioinformatics
2016[Nov]; 32
(21
): 3366-3368
PMID27402907
show ga
: BioNetGen is an open-source software package for rule-based modeling of complex
biochemical systems. Version 2.2 of the software introduces numerous new features
for both model specification and simulation. Here, we report on these additions,
discussing how they facilitate the construction, simulation and analysis of
larger and more complex models than previously possible. AVAILABILITY AND
IMPLEMENTATION: Stable BioNetGen releases (Linux, Mac OS/X and Windows), with
documentation, are available at http://bionetgen.org Source code is available at
http://github.com/RuleWorld/bionetgen CONTACT:
bionetgen.help@gmail.comSupplementary information: Supplementary data are
available at Bioinformatics online.