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2014 ; 30
(12
): 1785-6
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BicOverlapper 2 0: visual analysis for gene expression
#MMPMID24590442
Santamaría R
; Therón R
; Quintales L
Bioinformatics
2014[Jun]; 30
(12
): 1785-6
PMID24590442
show ga
MOTIVATION: Systems biology demands the use of several point of views to get a
more comprehensive understanding of biological problems. This usually leads to
take into account different data regarding the problem at hand, but it also has
to do with using different perspectives of the same data. This multifaceted
aspect of systems biology often requires the use of several tools, and it is
often hard to get a seamless integration of all of them, which would help the
analyst to have an interactive discourse with the data. RESULTS: Focusing on
expression profiling, BicOverlapper 2.0 visualizes the most relevant aspects of
the analysis, including expression data, profiling analysis results and
functional annotation. It also integrates several state-of-the-art numerical
methods, such as differential expression analysis, gene set enrichment or
biclustering. AVAILABILITY AND IMPLEMENTATION: BicOverlapper 2.0 is available at:
http://vis.usal.es/bicoverlapper2